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Name | Description | Type | Download | |||||
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NYClimateMarch2014 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on People's Climate March in 2014. |
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3 layers Multiplex Nodes: 102439 Edges: 353495 |
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Cannes2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on Cannes Film Festival in 2013. |
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3 layers Multiplex Nodes: 438537 Edges: 991854 |
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MoscowAthletics2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on 2013 World Championships in Athletics. |
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3 layers Multiplex Nodes: 88804 Edges: 210250 |
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MLKing2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on 50th aniversary of Marthin Luther King's speech "I have a dream..." in 2013. |
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3 layers Multiplex Nodes: 327707 Edges: 396671 |
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ObamaInIsrael2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on a visit to Israel by US President Barack Obama in 2013
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3 layers Multiplex Nodes: 2281259 Edges: 4061960 |
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UCLFinal2016 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on Uefa Champions League final in 2016. |
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3 layers Multiplex Nodes: 677145 Edges: 1673492 |
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NBAFINALS2015 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on NBA finals in 2015. |
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3 layers Multiplex Nodes: 747937 Edges: 2150187 |
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GRAVITATIONAL_WAVES_2016 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on the Gravitational Waves Discovery in 2016. |
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3 layers Multiplex Nodes: 362086 Edges: 721590 |
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Sanremo2016_final |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on the final of Sanremo Music Festival in 2016. |
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3 layers Multiplex Nodes: 56562 Edges: 461838 |
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ParisAttack2015 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on the Paris Attacks in 2015. |
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3 layers Multiplex Nodes: 1896221 Edges: 4163947 |
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PopeElection2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on the Pope Francis Conclave in 2013. |
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3 layers Multiplex Nodes: 2064866 Edges: 5969189 |
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BostonBomb2013 |
We consider different types of social relationships amoung users, obtained from Twitter during an exceptional event. In this specific dataset we focused on the Boston Bombing Attacks in 2013. |
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3 layers Multiplex Nodes: 4377184 Edges: 9480331 |
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ECCS2013 | Day-by-day interactions over Twitter between people attending the ECCS 2013 conference in
Barcelona. This is a time-varying multiplex network, with two layers corresponding to two different actions: mentioning and retweeting. See more details in the webpage dedicated to ECCS 2013 |
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HIGGS TWITTER | The Higgs dataset has been built after monitoring the spreading processes on Twitter before, during and after the announcement of the discovery of a new particle with the features of the elusive Higgs boson on 4th July 2012. The messages posted in Twitter about this discovery between 1st and 7th July 2012 are considered. Ref: M. De Domenico, A. Lima, P. Mougel and M. Musolesi. The Anatomy of a Scientific Rumor. (Nature Open Access) Scientific Reports 3, 2980 (2013). |
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Friends/follower graph Nodes: 456631 Edges: 14855875 |
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Graph of who retweets whom Nodes: 425008 Edges: 733647 |
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Graph of who replies to who Nodes: 37366 Edges: 30836 |
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Graph of who mentions whom Nodes: 302975 Edges: 449827 |
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HIGGS MULTIPLEX | Multiplex of social interactions in Twitter corresponding to the
different actions (friendship, replying, mentioning and retweeting) monitored in the Higgs dataset (see above) There are two multiplex networks: 1) two layers, friendship and aggregated interactions, respectively; 2) four layers, friendship and each type of interaction in each layer separately. See more details in the webpage dedicated to Higgs Rumor Ref: M. De Domenico, A. Lima, P. Mougel and M. Musolesi The Anatomy of a Scientific Rumor. (Nature Open Access) Scientific Reports 3, 2980 (2013). Files format: layerID nodeID nodeID weight |
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2-layers Multiplex Nodes: 456631 |
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4-layers Multiplex Nodes: 456631 |
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LONDON MULTIPLEX TRANSPORT NETWORK |
Data was collected in 2013 from the official website of Transport for London ( https://www.tfl.gov.uk/) and manually cross-checked. Nodes are train stations in London and edges encode existing routes between stations. Underground, Overground and DLR stations are considered (see https://www.tfl.gov.uk/ for further details). The multiplex network used in the paper makes use of three layers corresponding to:
Raw data and geographical coordinates of stations are provided. We also provide the multiplex networks after considering real disruptions occurring in London. Ref: Manlio De Domenico, Albert Solé-Ribalta, Sergio Gómez, and Alex Arenas, Navigability of interconnected networks under random failures. PNAS 111, 8351-8356 (2014) Files format: layerID nodeID nodeID weight |
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[3 | 13] - layers Multiplex Nodes: 369 Edges: 441(503) |
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EU-AIR TRANSPORTATION MULTIPLEX |
The multilayer network is composed by thirty-seven different layers each one corresponding to a different airline operating in Europe.
Files format: layerID nodeID nodeID weight |
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37 layers Multiplex Nodes: 450 Edges: 3588 |
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CS-AARHUS |
The multiplex social network consists of five kinds of online and offline relationships (Facebook, Leisure, Work, Co-authorship, Lunch) between the employees of Computer Science department at Aarhus.
Files format: layerID nodeID nodeID weight |
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5 layers Multiplex Nodes: 61 Edges: 620 |
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CKM PHYSICIANS INNOVATION |
Data collected by Coleman, Katz and Menzel on medical innovation, considering physicians in four towns in Illinois, Peoria, Bloomington, Quincy and Galesburg.
Ref: J. Coleman, E. Katz, and H. Menzel.- "The Diffusion of an Innovation Among Physicians". Sociometry (1957) 20:253-270. Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 246 Edges: 1551 |
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KAPFERER TAILOR SHOP |
Interactions in a tailor shop in Zambia (then Northern Rhodesia) over a period of ten months. Files format: layerID nodeID nodeID weight |
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4 layers Multiplex Nodes: 39 Edges: 1018 |
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KRACKHARDT HIGH TECH |
The multiplex social network consists of 3 kinds of relationships (Advice, Friendship and "Reports to") between managers of a high-tech company.
Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 21 Edges: 312 |
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LAZEGA LAW FIRM |
The multiplex social network consists of 3 kinds of (Co-work, Friendship and Advice) between partners and associates of a corporate law partnership.
Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 71 Edges: 2223 |
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PEDGETT FLORENTINE FAMILIES |
The multiplex social network consists of 2 layers (marriage alliances and business relationships) describing florentine families in the Renaissance.
Files format: layerID nodeID nodeID weight |
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2 layers Multiplex Nodes: 16 Edges: 35 |
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VICKERS CHAN 7THGRADERS |
The data were collected by Vickers from 29 seventh grade students in a school in Victoria, Australia. Students were asked to nominate their classmates on a number of relations including the following three (layers):
Ref: M. Vickers and S. Chan - Representing Classroom Social Structure. Melbourne: Victoria Institute of Secondary Education. (1981) Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 29 Edges: 740 |
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C.ELEGANS MULTIPLEX CONNECTOME |
Caenorhabditis elegans connectome, where the multiplex consists of layers corresponding to different synaptic junctions: electric ("ElectrJ"), chemical monadic ("MonoSyn"), and polyadic ("PolySyn").
Ref: Beth L. Chen, David H. Hall, and Dmitri B. Chklovskii - "Wiring optimization can relate neuronal structure and function" - PNAS 2006 103 (12) 4723–4728 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 279 Edges: 5863 |
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ARABIDOPSIS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns arabidopsis thaliana.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 6980 Edges: 18654 |
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BOS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Bos Linnaeus.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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4 layers Multiplex Nodes: 321 Edges: 325 |
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CANDIDA MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Candida Albicans.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 367 Edges: 397 |
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CELEGANS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Caenorhabditis Elegans.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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6 layers Multiplex Nodes: 3879 Edges: 8181 |
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DANIORERIO MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
Ref: C. Stark, B.-J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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5 layers Multiplex Nodes: 155 Edges: 188 |
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DROSOPHILA MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Drosophila Melanogaster.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 8215 Edges: 43366 |
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GALLUS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Gallus Gallus.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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6 layers Multiplex Nodes: 313 Edges: 388 |
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HEPATITUSC MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 105 Edges: 137 |
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HOMO MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns homo sapiens.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 18222 Edges: 170899 |
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HUMAN-HERPES4 MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns human herpes virus 4.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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4 layers Multiplex Nodes: 216 Edges: 259 |
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HUMAN-HIV1 MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns human HIV type 4.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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5 layers Multiplex Nodes: 1005 Edges: 1355 |
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MUS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Mus Musculus.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 7747 Edges: 19842 |
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ORYCTOLAGUS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns homo sapiens.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 144 Edges: 144 |
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PLASMODIUM MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Plasmodium Falciparum.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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3 layers Multiplex Nodes: 1023 Edges: 2521 |
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RATTUS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Rattus Norvegicus.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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6 layers Multiplex Nodes: 2640 Edges: 4267 |
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SACCHCERE MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Saccharomyces Cerevisiae.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 6570 Edges: 282754 |
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SACCHPOMB MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns Saccharomyces Pombe.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 M. De Domenico, V. Nicosia, A. Arenas, and V. Latora - "Structural reducibility of multilayer networks" - Nature Communications 2015 6, 6864 Files format: layerID nodeID nodeID weight |
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7 layers Multiplex Nodes: 4092 Edges: 63676 |
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XENOPUS MULTIPLEX GPI NETWORK |
We consider different types of genetic interactions for organisms in the Biological General Repository for Interaction Datasets (BioGRID, thebiogrid.org), a public database that archives and disseminates genetic and protein interaction data from humans and model organisms. BioGRID currently includes more than 720,000 interactions that have been curated from both high-throughput data sets and individual focused studies using over 41,000 publications in the primary literature. We use BioGRID 3.2.108 (updated 1 Jan 2014).
The present folder concerns xenopus laevis.
Ref: C. Stark, B. -J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and M. Tyers. - "Biogrid: a general repository for interaction datasets" - Nucleic Acids Research 2006 34 (1) D535–D539 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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5 layers Multiplex Nodes: 461 Edges: 620 |
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YEAST LANDSCAPE MULTIPLEX NETWORK |
Multiplex in which the layers correspond to interaction networks of genes in Saccharomyces cerevisiae (which was obtained via a synthetic genetic-array methodology) and correlation-based networks in which genes with similar interaction profiles are connected to each other. Positive and negative interactions, as well as positive and negative correlations, are considered.
Ref: M. Costanzo et al. - "The Genetic Landscape of a Cell" - Science 2010 327 (5964) 425-431 Manlio De Domenico, Mason A. Porter, and Alex Arenas - "MuxViz: A Tool for Multilayer Analysis and Visualization of Networks" - Journal of Complex Networks 2015 3 (2) 159-176 Files format: layerID nodeID nodeID weight |
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4 layers Multiplex Nodes: 4458 Edges: 8473997 |
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ARXIV NETSCIENCE MULTIPLEX |
The multiplex consists of layers corresponding to different arXiv categories. To restrict the analysis to a well-defined topic of research, we only included papers with "networks" in the title or abstract up to May 2014.
Ref: Manlio De Domenico, Andrea Lancichinetti, Alex Arenas, and Martin Rosvall - "Identifying Modular Flows on Multilayer Networks Reveals Highly Overlapping Organization in Interconnected Systems" - Physical Review X 5 (2015) 011027 Files format: layerID nodeID nodeID weight |
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13 layers Multiplex Nodes: 14489 Edges: 59026 |
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PIERRE AUGER MULTIPLEX |
The multiplex consists of layers corresponding to different working tasks within the Pierre Auger Collaboration. We considered all submissions between 2010 and 2012 and assigned each report to 16 layers according to its keywords and its content, with manual disambiguation to avoid spurious results from an automated process.
Ref: Manlio De Domenico, Andrea Lancichinetti, Alex Arenas, and Martin Rosvall - "Identifying Modular Flows on Multilayer Networks Reveals Highly Overlapping Organization in Interconnected Systems" - Physical Review X 5 (2015) 011027 Files format: layerID nodeID nodeID weight |
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16 layers Multiplex Nodes: 514 Edges: 7153 |
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FAO MULTIPLEX TRADE NETWORK |
We consider different types of trade relationships amoung countries, obtained from FAO (Food and Agriculture Organization of the United Nations). The worldwide food import/export network is an economic network in which layers represent products, nodes are countries and edges at each layer represent import/export relationships of a specific food product among countries. We collected the data from FAO and built the multilayer network corresponding to trading in 2010.
Files format: layerID nodeID nodeID weight |
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364 layers Multiplex Nodes: 214 Edges: 318346 |
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